Bottleneck

Bottleneck is a collection of fast, NaN-aware NumPy array functions written in C.

As one example, to check if a np.array has any NaNs using numpy, one must call np.any(np.isnan(array)). The bottleneck.anynan() function interleaves the np.isnan() check with np.any() pre-exit, enabling up to an O(N) speedup relative to numpy.

Bottleneck strives to be a drop-in accelerator for NumPy functions. When using the following libraries, Bottleneck support is automatically enabled and utilized:

Details on the performance benefits can be found in Benchmark